Small molecules which reverse hepatocellular carcinoma
Canned Analysis
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General Information
AccessionDCA00010489
TitleSmall molecules which reverse hepatocellular carcinoma
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which reverse the hepatocellular carcinoma gene expression signature in the HCC tumor and matched non-tumor surrounding tissues cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1c0bae467bea600fb852c
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:663
Cell TypeHCC tumor and matched non-tumor surrounding tissues
DO IDDOID:684
Disease Namehepatocellular carcinoma
Organismhuman
UMLS CUIC0279607
L1000CDS2 parameters
Directionreverse
Characteristic Direction parameters
Control SamplesGSM979123, GSM979124, GSM979125, GSM979126, GSM979127, GSM979128, GSM979129, GSM979130, GSM979131, GSM979132, GSM979133, GSM979134, GSM979135, GSM979136, GSM979137, GSM979138, GSM979139, GSM979140, GSM979141, GSM979142, GSM979143, GSM979144, GSM979145, GS
Perturbed SamplesGSM979051, GSM979052, GSM979053, GSM979054, GSM979055, GSM979056, GSM979057, GSM979058, GSM979059, GSM979060, GSM979061, GSM979062, GSM979063, GSM979064, GSM979065, GSM979066, GSM979067, GSM979068, GSM979069, GSM979070, GSM979071, GSM979072, GSM979073, GS
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE39791
Gene Expression Omnibus
Hepatic regeneration gene expression signature predicts late recurrence of hepatocellular carcinoma
7
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