Small molecules which mimic colitis
Canned Analysis
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General Information
AccessionDCA00010722
TitleSmall molecules which mimic colitis
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the colitis gene expression signature in the Colon (DSS - induced colitis) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1ba6ce467bea600fb8206
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:800
Cell TypeColon (DSS - induced colitis)
DO IDDOID:0060180
Disease Namecolitis
Organismmouse
UMLS CUIC0009319
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM856807, GSM856808, GSM856809
Perturbed SamplesGSM856813, GSM856814, GSM856815
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE34874
Gene Expression Omnibus
DSS-induced colitis model response to L-arginine supplementation
14
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