Small molecules which reverse Barrett's esophagus
Canned Analysis
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General Information
AccessionDCA00010899
TitleSmall molecules which reverse Barrett's esophagus
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which reverse the Barrett's esophagus gene expression signature in the Esophageal squamous epithelium cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1bc9ee467bea600fb8320
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:917
Cell TypeEsophageal squamous epithelium
DO IDDOID:9206
Disease NameBarrett's esophagus
Organismhuman
UMLS CUIC0004763
L1000CDS2 parameters
Directionreverse
Characteristic Direction parameters
Control SamplesGSM327642, GSM327643, GSM327644, GSM327645, GSM327646, GSM327647, GSM327648
Perturbed SamplesGSM327649, GSM327650, GSM327651, GSM327652, GSM327653, GSM327654, GSM327655
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE13083
Gene Expression Omnibus
Barrett's esophagus
7
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