Enrichment analysis of genes dysregulated in Spinal Cord Injury
Canned Analysis
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General Information
AccessionDCA00011337
TitleEnrichment analysis of genes dysregulated in Spinal Cord Injury
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between cells affected by Spinal Cord Injury and healthy control cells in the CNS - Spinal Cord (MMHCC) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3085843
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorJoel.Dudley
CREEDS IDdz:427
Cell TypeCNS - Spinal Cord (MMHCC)
Disease NameSpinal Cord Injury
Organismrat
UMLS CUIC0037929
Characteristic Direction parameters
Control SamplesGSM418673, GSM418674, GSM418675, GSM418676, GSM418677, GSM418678, GSM418679, GSM418680, GSM418681, GSM418682, GSM418683
Perturbed SamplesGSM418657, GSM418658, GSM418659, GSM418660, GSM418661, GSM418662, GSM418663, GSM418664, GSM418665, GSM418666, GSM418667, GSM418668, GSM418669, GSM418670, GSM418671, GSM418672
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE16710
Gene Expression Omnibus
Expression data from adult rat tail MNs after spinal cord transection
7
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