Enrichment analysis of genes dysregulated in hepatitis C virus related hepatocellular carcinoma
Canned Analysis
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General Information
AccessionDCA00011626
TitleEnrichment analysis of genes dysregulated in hepatitis C virus related hepatocellular carcinoma
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between cells affected by hepatitis C virus related hepatocellular carcinoma and healthy control cells in the Peripheral blood mononuclear cells cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3086123
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:736
Cell TypePeripheral blood mononuclear cells
Disease Namehepatitis C virus related hepatocellular carcinoma
Organismhuman
UMLS CUIC1333978
Characteristic Direction parameters
Control SamplesGSM1403331, GSM1403332, GSM1403333, GSM1403334, GSM1403335
Perturbed SamplesGSM1403319, GSM1403320, GSM1403321, GSM1403322, GSM1403323, GSM1403324, GSM1403325, GSM1403326, GSM1403327, GSM1403328, GSM1403329, GSM1403330
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE58208
Gene Expression Omnibus
Gene expression profiling of PBMC from normal individuals, chronic hepatitis B carriers and hepatocellular carcinoma patients
14
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