Enrichment analysis of genes dysregulated in Ischemic stroke
Canned Analysis
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General Information
AccessionDCA00011714
TitleEnrichment analysis of genes dysregulated in Ischemic stroke
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between cells affected by Ischemic stroke and healthy control cells in the Peripheral blood mononuclear cells (collected from IS patients at least 6 months after the first and only stroke event) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3085906
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdz:856
Cell TypePeripheral blood mononuclear cells (collected from IS patients at least 6 months after the first and only stroke event)
Disease NameIschemic stroke
Organismhuman
UMLS CUIC0948008
Characteristic Direction parameters
Control SamplesGSM554014, GSM554015, GSM554016, GSM554017, GSM554018, GSM554019, GSM554020, GSM554021, GSM554022, GSM554023, GSM554024, GSM554025, GSM554026, GSM554027, GSM554028, GSM554029, GSM554030, GSM554031, GSM554032, GSM554033
Perturbed SamplesGSM554034, GSM554035, GSM554036, GSM554037, GSM554038, GSM554039, GSM554040, GSM554041, GSM554042, GSM554043, GSM554044, GSM554045, GSM554046, GSM554047, GSM554048, GSM554049, GSM554050, GSM554051, GSM554052, GSM554053
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE22255
Gene Expression Omnibus
Ischemic stroke: peripheral blood mononuclear cells
7
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