Small molecules which mimic Cadmium treatment
Canned Analysis
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General Information
AccessionDCA00013060
TitleSmall molecules which mimic Cadmium treatment
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by Cadmium treatment in the NPrEC immortalized normal prostate epithelial cell line - 2.5uM - 0 Hour cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1e4a6e467bea600fb95b8
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdrug:3402
Cell TypeNPrEC immortalized normal prostate epithelial cell line - 2.5uM - 0 Hour
Drug NameCadmium
Organismhuman
PubChem CID23973
SMILES ID[Cd]
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM251630, GSM251633
Perturbed SamplesGSM251620, GSM251621
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE9951
Gene Expression Omnibus
Low-dose cadmium effect on prostate epithelial cells: time course
28
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