Small molecules which reverse Sodium butyrate treatment
Canned Analysis
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General Information
AccessionDCA00013357
TitleSmall molecules which reverse Sodium butyrate treatment
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which reverse the gene expression signature induced by Sodium butyrate treatment in the Colonic epithelial cells - 24 Hours cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1d520e467bea600fb8eda
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdrug:3584
Cell TypeColonic epithelial cells - 24 Hours
Drug NameSodium butyrate
Organismmouse
PubChem CID5222465
SMILES IDCCCC(=O)[O-].[Na+]
L1000CDS2 parameters
Directionreverse
Characteristic Direction parameters
Control SamplesGSM99411, GSM99416
Perturbed SamplesGSM99415, GSM99419
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE4410
Gene Expression Omnibus
Sodium butyrate effect on colonic epithelial cells: time course
21
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