Enrichment analysis of genes dysregulated following Trichostatin a treatment
Canned Analysis
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General Information
AccessionDCA00013933
TitleEnrichment analysis of genes dysregulated following Trichostatin a treatment
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between Trichostatin a treated cells and untreated control cells in the F9 embryonal carcinoma cell line cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3088831
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdrug:3085
Cell TypeF9 embryonal carcinoma cell line
Drug NameTrichostatin a
Organismmouse
PubChem CID444732
SMILES IDCC(C=C(C)C=CC(=O)NO)C(=O)C1=CC=C(C=C1)N(C)C
Characteristic Direction parameters
Control SamplesGSM24053, GSM24054, GSM24055
Perturbed SamplesGSM24146, GSM24147, GSM24148
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE1437
Gene Expression Omnibus
Embryonal carcinoma cell line response to retinoic acid or trichostatin A
14
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