Enrichment analysis of genes dysregulated following Lipopolysaccharide treatment
Canned Analysis
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General Information
AccessionDCA00014336
TitleEnrichment analysis of genes dysregulated following Lipopolysaccharide treatment
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between Lipopolysaccharide treated cells and untreated control cells in the Adult mononuclear cells - 5 ug/ml LPS cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3088801
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDdrug:3594
Cell TypeAdult mononuclear cells - 5 ug/ml LPS
Drug NameLipopolysaccharide
Organismhuman
PubChem CID11970143
SMILES IDCCCCCCCCCCCCCCCC1C(OC(C(C1OC(=O)CC(CCCCCCCCCCC)O)O)COC2C(C(C(C(O2)COC3(CC(C(C(O3)C(CO)O)OC4C(C(C(C(O4)C(CO)O)OP(=O)(O)OP(=O)(O)OCCN)OC5C(C(C(C(O5)C(COC6C(C(C(CO6)(C(CO)O)O)O)O)O)OP(=O)(O)O)OC7C(C(C(C(O7)COC8C(C(C(C(O8)CO)O)O)O)O)OC9C(C(C(C(O9)CO)O)O)OC1C(
Characteristic Direction parameters
Control SamplesGSM70121, GSM70122, GSM70123
Perturbed SamplesGSM70124, GSM71079, GSM71080
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE3140
Gene Expression Omnibus
Neonatal mononuclear cell response to lipopolysaccharide
14
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