Small molecules which mimic CBX3 KD
Canned Analysis
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General Information
AccessionDCA00020407
TitleSmall molecules which mimic CBX3 KD
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by CBX3 KD in the pre-iPSCs cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d225dfe467bea600fbb1ec
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorFabioAmaral
CREEDS IDgene:1374
Cell Typepre-iPSCs
Gene Symbol (human)CBX3
Gene Symbol (mouse)Cbx3
Organismmouse
Perturbation TypeKD
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM1078126, GSM1078127, GSM1078128
Perturbed SamplesGSM1078131, GSM1078132, GSM1078133
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE44084
Gene Expression Omnibus
Expression data from pre-iPSCs with a control, histone methyltransferase or Cbx3 (HP1g) knockdown
7
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