Small molecules which mimic HDAC1 KD
Canned Analysis
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General Information
AccessionDCA00020453
TitleSmall molecules which mimic HDAC1 KD
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by HDAC1 KD in the primary erythroid progenitor cells cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d22007e467bea600fbaf5c
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorFabioAmaral
CREEDS IDgene:1411
Cell Typeprimary erythroid progenitor cells
Gene Symbol (human)HDAC1
Gene Symbol (mouse)Hdac1
Organismhuman
Perturbation TypeKD
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM556579, GSM556580, GSM556581
Perturbed SamplesGSM556582, GSM556583
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE22366
Gene Expression Omnibus
Primary human erythroid progenitor cells HDAC1 and HDAC2 shRNA knockdown samples
21
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