Small molecules which mimic RARA KO
Canned Analysis
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General Information
AccessionDCA00020867
TitleSmall molecules which mimic RARA KO
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by RARA KO in the F9 cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1fdf3e467bea600fba090
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorHollyWoodland
CREEDS IDgene:1677
Cell TypeF9
Gene Symbol (human)RARA
Gene Symbol (mouse)Rara
Organismmouse
Perturbation TypeKO
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM775293, GSM775297, GSM775301
Perturbed SamplesGSM775291, GSM775295, GSM775299
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE31280
Gene Expression Omnibus
All-trans retinoic acid effect on retinoic acid receptor -deficient F9 teratocarcinoma cells
21
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