Small molecules which mimic SOD1 SOD1-G93A transgenic
Canned Analysis
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General Information
AccessionDCA00021059
TitleSmall molecules which mimic SOD1 SOD1-G93A transgenic
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by SOD1 SOD1-G93A transgenic in the Spinal cord cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d22131e467bea600fbafe0
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDgene:1767
Cell TypeSpinal cord
Gene Symbol (human)SOD1
Gene Symbol (mouse)Sod1
Organismmouse
Perturbation TypeSOD1-G93A transgenic
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM99330, GSM99331
Perturbed SamplesGSM99332, GSM99334
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE4390
Gene Expression Omnibus
SOD1-G93A transgenic model of amyotrophic lateral sclerosis: spinal cord
12
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