Small molecules which mimic RBP2 KD
Canned Analysis
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General Information
AccessionDCA00021107
TitleSmall molecules which mimic RBP2 KD
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by RBP2 KD in the H1299 lung cancer cell line cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d22666e467bea600fbb228
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgszeto
CREEDS IDgene:1791
Cell TypeH1299 lung cancer cell line
Gene Symbol (human)RBP2
Gene Symbol (mouse)Rbp2
Organismhuman
Perturbation TypeKD
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM1017446, GSM1017447
Perturbed SamplesGSM1017442, GSM1017443
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE41443
Gene Expression Omnibus
Expression data in H1299 after retinoblastoma binding protein-2 (RBP2) knockdown
21
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