Small molecules which mimic AGR2 KD
Canned Analysis
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General Information
AccessionDCA00021225
TitleSmall molecules which mimic AGR2 KD
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by AGR2 KD in the pancreatic cancer cell line FA6 transiently transfected cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d239b1e467bea600fbbaac
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgszeto
CREEDS IDgene:1843
Cell Typepancreatic cancer cell line FA6 transiently transfected
Gene Symbol (human)AGR2
Gene Symbol (mouse)Agr2
Organismhuman
Perturbation TypeKD
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM314408, GSM314409, GSM314410
Perturbed SamplesGSM314405, GSM314406, GSM314407
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE12513
Gene Expression Omnibus
Genes regulated by AGR2 in pancreatic cancer cell lines FA6 and MiaPaCa2
14
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