Small molecules which mimic HMGN5 OE
Canned Analysis
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General Information
AccessionDCA00021867
TitleSmall molecules which mimic HMGN5 OE
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by HMGN5 OE in the clone type: AtT20 clone mouse pituitary gland cells cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d2311ce467bea600fbb6e4
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgszeto
CREEDS IDgene:2297
Cell Typeclone type: AtT20 clone mouse pituitary gland cells
Gene Symbol (human)HMGN5
Organismmouse
Perturbation TypeOE
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM416605, GSM416606, GSM416607
Perturbed SamplesGSM416602, GSM416603, GSM416604
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE16564
Gene Expression Omnibus
Expression data from AtT20 mouse pituitary gland cells following overexpression or down regulation of NSBP1
21
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