Small molecules which mimic CHRNA9 KO
Canned Analysis
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General Information
AccessionDCA00021965
TitleSmall molecules which mimic CHRNA9 KO
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by CHRNA9 KO in the cochlea at P3 cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d2338de467bea600fbb7f6
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatornbongio
CREEDS IDgene:2362
Cell Typecochlea at P3
Gene Symbol (human)CHRNA9
Organismmouse
Perturbation TypeKO
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM462007, GSM462008, GSM462009
Perturbed SamplesGSM462010, GSM462011, GSM462012
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE18567
Gene Expression Omnibus
Temporal profiling of gene expression in cochleae of wild type and alpha9 null mice
28
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