Small molecules which mimic MIR122 KO
Canned Analysis
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General Information
AccessionDCA00022039
TitleSmall molecules which mimic MIR122 KO
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by MIR122 KO in the background strain: B6/129 tissue: Liver age: 2 Month cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d20bd5e467bea600fba6b0
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgszeto
CREEDS IDgene:2407
Cell Typebackground strain: B6/129 tissue: Liver age: 2 Month
Gene Symbol (human)MIR122
Organismmouse
Perturbation TypeKO
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM686185, GSM686186, GSM686187
Perturbed SamplesGSM686188, GSM686189, GSM686190, GSM686191
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE27713
Gene Expression Omnibus
Genome-wide analysis of gene expression patterns in mir-122 knockout mice livers
7
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