Small molecules which mimic MIR517A OE
Canned Analysis
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General Information
AccessionDCA00022307
TitleSmall molecules which mimic MIR517A OE
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by MIR517A OE in the Huh-7 hepatocellular carcinoma cell line transduced with lentivirus. GFP+ cells were sorted by fluorescence-activated cell sorting (FACS) analysis cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d2340be467bea600fbb82e
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgszeto
CREEDS IDgene:2561
Cell TypeHuh-7 hepatocellular carcinoma cell line transduced with lentivirus. GFP+ cells were sorted by fluorescence-activated cell sorting (FACS) analysis
Gene Symbol (human)MIR517A
Organismhuman
Perturbation TypeOE
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM518632, GSM518633, GSM518634
Perturbed SamplesGSM518635, GSM518636, GSM518637
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE20679
Gene Expression Omnibus
mRNA expression profile modified by microRNA mir-517a (MIR517A) in human hepatocellular carcinoma cell line
7
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