Small molecules which mimic HMGA2 OE
Canned Analysis
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General Information
AccessionDCA00022311
TitleSmall molecules which mimic HMGA2 OE
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by HMGA2 OE in the strain: C57BL/6J cell type: bone marrow, c-Kit+Lin-Sca-1+ (KLS) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d233fae467bea600fbb826
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgszeto
CREEDS IDgene:2563
Cell Typestrain: C57BL/6J cell type: bone marrow, c-Kit+Lin-Sca-1+ (KLS)
Gene Symbol (human)HMGA2
Organismmouse
Perturbation TypeOE
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM592264, GSM592269
Perturbed SamplesGSM592262, GSM592266
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE24071
Gene Expression Omnibus
HMGA2 overexpression
14
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