Small molecules which mimic PAX3 KD
Canned Analysis
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General Information
AccessionDCA00022593
TitleSmall molecules which mimic PAX3 KD
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by PAX3 KD in the NZM15 cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1f5cee467bea600fb9d3e
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorApozar
CREEDS IDgene:2757
Cell TypeNZM15
Gene Symbol (human)PAX3
Gene Symbol (mouse)Pax3
Organismhuman
Perturbation TypeKD
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM409126, GSM409130
Perturbed SamplesGSM409129, GSM409133
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE16249
Gene Expression Omnibus
siRNA-mediated knockdown of MITF and PAX3 in metastatic melanoma cell lines
7
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