Small molecules which reverse STAG2 KO
Canned Analysis
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General Information
AccessionDCA00022758
TitleSmall molecules which reverse STAG2 KO
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which reverse the gene expression signature induced by STAG2 KO in the HCT116 cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d2075fe467bea600fba4ba
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorsara
CREEDS IDgene:2845
Cell TypeHCT116
Gene Symbol (human)STAG2
Gene Symbol (mouse)Stag2
Organismhuman
Perturbation TypeKO
L1000CDS2 parameters
Directionreverse
Characteristic Direction parameters
Control SamplesGSM698543, GSM698544
Perturbed SamplesGSM698545, GSM698546
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE28214
Gene Expression Omnibus
Expression data from STAG2 deficient and proficient human cancer cells
7
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