Small molecules which mimic GATA5 KO
Canned Analysis
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General Information
AccessionDCA00023345
TitleSmall molecules which mimic GATA5 KO
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by GATA5 KO in the lung cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d23279e467bea600fbb77c
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorudicuty
CREEDS IDgene:413
Cell Typelung
Gene Symbol (human)GATA5
Gene Symbol (mouse)Gata5
Organismmouse
Perturbation TypeKO
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM1149298, GSM1149299, GSM1149300
Perturbed SamplesGSM1149295, GSM1149296, GSM1149297
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE47425
Gene Expression Omnibus
Gata5 deficiency effect on the lung
14
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