Small molecules which mimic HMGN1 KO
Canned Analysis
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General Information
AccessionDCA00023357
TitleSmall molecules which mimic HMGN1 KO
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by HMGN1 KO in the liver cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d2287fe467bea600fbb318
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorzero323
CREEDS IDgene:433
Cell Typeliver
Gene Symbol (human)HMGN1
Gene Symbol (mouse)Hmgn1
Organismmouse
Perturbation TypeKO
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM1083898, GSM1083899, GSM1083900
Perturbed SamplesGSM1083901, GSM1083902, GSM1083903
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE44356
Gene Expression Omnibus
N-nitrosodiethylamine effect on high mobility group N 1 chromosomal protein-deficient liver
14
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