Small molecules which mimic SNCA KO
Canned Analysis
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General Information
AccessionDCA00023401
TitleSmall molecules which mimic SNCA KO
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by SNCA KO in the Cerebellum - 21 month cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d23d09e467bea600fbbc26
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDgene:471
Cell TypeCerebellum - 21 month
Gene Symbol (human)SNCA
Gene Symbol (mouse)Snca
Organismmouse
Perturbation TypeKO
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM487058, GSM487059, GSM487060, GSM487061
Perturbed SamplesGSM487062, GSM487063, GSM487064, GSM487065
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE19534
Gene Expression Omnibus
Alpha-synuclein deficiency effect on striatum and cerebellum: time course
45
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