Small molecules which mimic TRIM33 KD
Canned Analysis
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General Information
AccessionDCA00023413
TitleSmall molecules which mimic TRIM33 KD
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by TRIM33 KD in the HMEC-TR mammary epithelial cell line cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d23cede467bea600fbbc1a
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDgene:476
Cell TypeHMEC-TR mammary epithelial cell line
Gene Symbol (human)TRIM33
Gene Symbol (mouse)Trim33
Organismhuman
Perturbation TypeKD
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM703137, GSM703142
Perturbed SamplesGSM703138, GSM703143
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE28448
Gene Expression Omnibus
TGF1 effect on HMEC-TR mammary epithelial cell line deficient in Smad4 or TIF1
7
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