Small molecules which mimic HMGA2 KO
Canned Analysis
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General Information
AccessionDCA00023421
TitleSmall molecules which mimic HMGA2 KO
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by HMGA2 KO in the lung (E18.5) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1fe28e467bea600fba0a8
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcarlfulp
CREEDS IDgene:48
Cell Typelung (E18.5)
Gene Symbol (human)HMGA2
Organismmouse
Perturbation TypeKO
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM1334375, GSM1334376
Perturbed SamplesGSM1334377, GSM1334378
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE55340
Gene Expression Omnibus
High Mobility Group AT-hook Protein 2 deficiency effect on the embryonic lung
7
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