Small molecules which mimic SOX4 RNAi Knock down
Canned Analysis
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General Information
AccessionDCA00023629
TitleSmall molecules which mimic SOX4 RNAi Knock down
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by SOX4 RNAi Knock down in the adenoid cystic carcinoma derived cells ACC3 cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d23088e467bea600fbb6a4
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDgene:64
Cell Typeadenoid cystic carcinoma derived cells ACC3
Gene Symbol (human)SOX4
Gene Symbol (mouse)Sox4
Organismhuman
Perturbation TypeRNAi Knock down
None{u'vals': [-0.0863927926574, 0.0649034226303, 0.0594306289866, -0.0577710136528, 0.0558806426818, 0.055228856837, -0.0544271015882, -0.0541205297516, -0.053614843085, 0.0526539078505, -0.0524701142212, 0.0516920812615, 0.0506807456686, 0.0501849686585, 0.
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM96347, GSM96348, GSM96349
Perturbed SamplesGSM96350, GSM96351, GSM96352
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE4225
Gene Expression Omnibus
Sry-related high mobility group box 4 knockdown effect on adenoid cystic carcinoma cells
7
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