Small molecules which reverse SMARCA4 DEPLETION
Canned Analysis
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General Information
AccessionDCA00023758
TitleSmall molecules which reverse SMARCA4 DEPLETION
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which reverse the gene expression signature induced by SMARCA4 DEPLETION in the Embryos (maternally depleted) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d21c51e467bea600fbadc2
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDgene:747
Cell TypeEmbryos (maternally depleted)
Gene Symbol (human)SMARCA4
Gene Symbol (mouse)Smarca4
Organismmouse
Perturbation TypeDEPLETION
L1000CDS2 parameters
Directionreverse
Characteristic Direction parameters
Control SamplesGSM122519, GSM122520, GSM122521, GSM122522
Perturbed SamplesGSM122523, GSM122524, GSM122525, GSM122526
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE5371
Gene Expression Omnibus
BRG1 maternally depleted embryos
7
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