Small molecules which reverse BNC1 KD
Canned Analysis
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General Information
AccessionDCA00024004
TitleSmall molecules which reverse BNC1 KD
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which reverse the gene expression signature induced by BNC1 KD in the oocytes cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d21430e467bea600fbaa5e
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDgene:97
Cell Typeoocytes
Gene Symbol (human)BNC1
Gene Symbol (mouse)Bnc1
Organismmouse
Perturbation TypeKD
L1000CDS2 parameters
Directionreverse
Characteristic Direction parameters
Control SamplesGSM92221, GSM92222, GSM92223, GSM92224
Perturbed SamplesGSM92225, GSM92226, GSM92227, GSM92228, GSM92229, GSM92230
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Datasets used in the analysis
Keyword
Tool Name
GSE4029
Gene Expression Omnibus
Zinc-finger protein basonuclin knockdown effect on oocytes
7
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