Enrichment analysis of genes dysregulated in TNF siTNF-OMe
Canned Analysis
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General Information
AccessionDCA00024114
TitleEnrichment analysis of genes dysregulated in TNF siTNF-OMe
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between TNF siTNF-OMe cells and control cells in the Colon cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3095690
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorOliFucMuc
CREEDS IDgene:1113
Cell TypeColon
Gene Symbol (human)TNF
Gene Symbol (mouse)Tnf
Organismmouse
Perturbation TypesiTNF-OMe
Characteristic Direction parameters
Control SamplesGSM790907, GSM790908, GSM790909, GSM790910, GSM790911, GSM790912, GSM790913, GSM790914, GSM790915
Perturbed SamplesGSM790929, GSM790930, GSM790931, GSM790932, GSM790933, GSM790934
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE31906
Gene Expression Omnibus
DSS-induced colitis model response to enhanced siRNA targeting of Tumor necrosis factor
28
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