Enrichment analysis of genes dysregulated in NOD2 KO
Canned Analysis
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General Information
AccessionDCA00024120
TitleEnrichment analysis of genes dysregulated in NOD2 KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between NOD2 KO cells and control cells in the Paneth cells (Ileum) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3095885
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorOliFucMuc
CREEDS IDgene:1120
Cell TypePaneth cells (Ileum)
Gene Symbol (human)NOD2
Gene Symbol (mouse)Nod2
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM1422810, GSM1422811, GSM1422812
Perturbed SamplesGSM1422813, GSM1422814, GSM1422815
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE58948
Gene Expression Omnibus
Gene expression analysis of crypt base epithelial cells from WT and Nod2-/- mice
7
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