Enrichment analysis of genes dysregulated in TLR4 KO
Canned Analysis
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General Information
AccessionDCA00024143
TitleEnrichment analysis of genes dysregulated in TLR4 KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between TLR4 KO cells and control cells in the kidney cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3090353
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorOliFucMuc
CREEDS IDgene:1141
Cell Typekidney
Gene Symbol (human)TLR4
Gene Symbol (mouse)Tlr4
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM847664, GSM847665, GSM847666
Perturbed SamplesGSM847670, GSM847671, GSM847672
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Datasets used in the analysis
Keyword
Tool Name
GSE34351
Gene Expression Omnibus
Gene expression profile on ischemic kidneys from wildtype C57BL/10 and TLR4 null C57BL/10ScNJ mice
7
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