Enrichment analysis of genes dysregulated in VDR KO
Canned Analysis
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General Information
AccessionDCA00024150
TitleEnrichment analysis of genes dysregulated in VDR KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between VDR KO cells and control cells in the Bone marrow derived macrophages (BMDMs) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3094596
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorHollyWoodland
CREEDS IDgene:1153
Cell TypeBone marrow derived macrophages (BMDMs)
Gene Symbol (human)VDR
Gene Symbol (mouse)Vdr
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM45581, GSM45586
Perturbed SamplesGSM45580, GSM45587
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Datasets used in the analysis
Keyword
Tool Name
GSE2421
Gene Expression Omnibus
1alpha,25-dihydroxyvitamin D3 suppressive effect on IFN-gamma activated macrophages
21
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