Enrichment analysis of genes dysregulated in RAG1 KO
Canned Analysis
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General Information
AccessionDCA00024246
TitleEnrichment analysis of genes dysregulated in RAG1 KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between RAG1 KO cells and control cells in the whole lung cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3091591
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorHollyWoodland
CREEDS IDgene:1240
Cell Typewhole lung
Gene Symbol (human)RAG1
Gene Symbol (mouse)Rag1
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM158136, GSM158137, GSM158144, GSM158145
Perturbed SamplesGSM158132, GSM158133, GSM158140, GSM158141
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE6858
Gene Expression Omnibus
Asthma model: lungs
7
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