Enrichment analysis of genes dysregulated in HTT CAG knock in
Canned Analysis
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General Information
AccessionDCA00024297
TitleEnrichment analysis of genes dysregulated in HTT CAG knock in
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between HTT CAG knock in cells and control cells in the cerebellum 3 ~ 10 weeks cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3092473
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcms
CREEDS IDgene:1283
Cell Typecerebellum 3 ~ 10 weeks
Gene Symbol (human)HTT
Gene Symbol (mouse)Htt
Organismmouse
Perturbation TypeCAG knock in
Characteristic Direction parameters
Control SamplesGSM229450, GSM229451, GSM229452, GSM229456, GSM229457, GSM229458
Perturbed SamplesGSM229453, GSM229454, GSM229455, GSM229459, GSM229460, GSM229461
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE9038
Gene Expression Omnibus
Huntington's disease CAG knock-in effect on striatum and cerebellum
24
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