Enrichment analysis of genes dysregulated in HDAC1 KD
Canned Analysis
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General Information
AccessionDCA00024414
TitleEnrichment analysis of genes dysregulated in HDAC1 KD
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between HDAC1 KD cells and control cells in the primary erythroid progenitor cells cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3093949
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorFabioAmaral
CREEDS IDgene:1411
Cell Typeprimary erythroid progenitor cells
Gene Symbol (human)HDAC1
Gene Symbol (mouse)Hdac1
Organismhuman
Perturbation TypeKD
Characteristic Direction parameters
Control SamplesGSM556579, GSM556580, GSM556581
Perturbed SamplesGSM556582, GSM556583
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE22366
Gene Expression Omnibus
Primary human erythroid progenitor cells HDAC1 and HDAC2 shRNA knockdown samples
21
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