Enrichment analysis of genes dysregulated in SHH KO
Canned Analysis
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General Information
AccessionDCA00024447
TitleEnrichment analysis of genes dysregulated in SHH KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between SHH KO cells and control cells in the posterior second heart field, day E9.5 cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3095842
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorOliFucMuc
CREEDS IDgene:1439
Cell Typeposterior second heart field, day E9.5
Gene Symbol (human)SHH
Gene Symbol (mouse)Shh
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM1090101, GSM1090104, GSM1090106
Perturbed SamplesGSM1090100, GSM1090102, GSM1090103, GSM1090105
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Datasets used in the analysis
Keyword
Tool Name
GSE44754
Gene Expression Omnibus
Posterior Second Heart Field (pSHF) transcriptomes of wild-type and Shh mutant mouse embryos
7
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