Enrichment analysis of genes dysregulated in BAP1 KO
Canned Analysis
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General Information
AccessionDCA00024493
TitleEnrichment analysis of genes dysregulated in BAP1 KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between BAP1 KO cells and control cells in the Clear-cell renal cell carcinoma tumor (VHL inactivated) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3091246
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorHollyWoodland
CREEDS IDgene:1495
Cell TypeClear-cell renal cell carcinoma tumor (VHL inactivated)
Gene Symbol (human)BAP1
Gene Symbol (mouse)Bap1
Organismhuman
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM904989, GSM905002, GSM905009, GSM905014, GSM905020, GSM905023, GSM905029, GSM905034
Perturbed SamplesGSM905004, GSM905024, GSM905038, GSM905043
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE36895
Gene Expression Omnibus
Clear-cell renal cell carcinoma tumors and tumorgrafts deficient for tumor suppressor BAP1 or PBRM1
21
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