Enrichment analysis of genes dysregulated in PHGDH KO
Canned Analysis
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General Information
AccessionDCA00024516
TitleEnrichment analysis of genes dysregulated in PHGDH KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between PHGDH KO cells and control cells in the embryonic head tissue cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3093039
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorantons
CREEDS IDgene:152
Cell Typeembryonic head tissue
Gene Symbol (human)PHGDH
Gene Symbol (mouse)Phgdh
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM212558, GSM212560, GSM212562, GSM212564
Perturbed SamplesGSM212559, GSM212561, GSM212563, GSM212565
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE8555
Gene Expression Omnibus
D-3-phosphoglycerate dehydrogenase deficiency effect on the embryonic head
7
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