Enrichment analysis of genes dysregulated in KDM5A KD
Canned Analysis
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General Information
AccessionDCA00024782
TitleEnrichment analysis of genes dysregulated in KDM5A KD
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between KDM5A KD cells and control cells in the cell line: ONS76 cell type: medulloblastoma cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3092195
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgszeto
CREEDS IDgene:1828
Cell Typecell line: ONS76 cell type: medulloblastoma
Gene Symbol (human)KDM5A
Gene Symbol (mouse)Kdm5a
Organismhuman
Perturbation TypeKD
Characteristic Direction parameters
Control SamplesGSM1065188, GSM1065189, GSM1065190
Perturbed SamplesGSM1065185, GSM1065186, GSM1065187
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Datasets used in the analysis
Keyword
Tool Name
GSE43552
Gene Expression Omnibus
Expression profiling of human medulloblastoma cell line ONS76 upon siRNA-mediated knockdown of KDM5A/LSD1
7
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