Enrichment analysis of genes dysregulated in SMCHD1 KO
Canned Analysis
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General Information
AccessionDCA00024802
TitleEnrichment analysis of genes dysregulated in SMCHD1 KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between SMCHD1 KO cells and control cells in the pre-B cells, day E17.5, C57BL/6 Eµ-Myc cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3096210
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorOliFucMuc
CREEDS IDgene:1845
Cell Typepre-B cells, day E17.5, C57BL/6 Eµ-Myc
Gene Symbol (human)SMCHD1
Gene Symbol (mouse)Smchd1
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM1004036, GSM1004038, GSM1004040
Perturbed SamplesGSM1004037, GSM1004039, GSM1004041
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE40879
Gene Expression Omnibus
The effect on gene expression of Smchd1 deletion in pre-B cells from E17.5 E-Myc embryos
7
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