Enrichment analysis of genes dysregulated in CDK8 knockdown
Canned Analysis
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General Information
AccessionDCA00024838
TitleEnrichment analysis of genes dysregulated in CDK8 knockdown
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between CDK8 knockdown cells and control cells in the unknown cell line stimulated with serum cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3094830
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorAndrew
CREEDS IDgene:1896
Cell Typeunknown cell line stimulated with serum
Gene Symbol (human)CDK8
Gene Symbol (mouse)Cdk8
Organismhuman
Perturbation Typeknockdown
Characteristic Direction parameters
Control SamplesGSM475978, GSM475979, GSM475982, GSM475983
Perturbed SamplesGSM475980, GSM475981, GSM475984, GSM475985
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE19199
Gene Expression Omnibus
Expression data from serum-starved control and CDK8 depleted cells following serum stimulation
7
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