Enrichment analysis of genes dysregulated in TRIM28 knockout
Canned Analysis
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General Information
AccessionDCA00024943
TitleEnrichment analysis of genes dysregulated in TRIM28 knockout
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between TRIM28 knockout cells and control cells in the Treg cells cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3095484
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorAndrew
CREEDS IDgene:2032
Cell TypeTreg cells
Gene Symbol (human)TRIM28
Gene Symbol (mouse)Trim28
Organismmouse
Perturbation Typeknockout
Characteristic Direction parameters
Control SamplesGSM798473, GSM798474, GSM798475, GSM798476
Perturbed SamplesGSM798477, GSM798478, GSM798479, GSM798480
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Datasets used in the analysis
Keyword
Tool Name
GSE32224
Gene Expression Omnibus
Comparison of gene expression in Wild type and T cell-specific conditional Trim28 KO in TCR stimulated and un-stimulated naive CD4 positive and T regu...
21
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