Enrichment analysis of genes dysregulated in TGFBR2 knockout
Canned Analysis
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General Information
AccessionDCA00024969
TitleEnrichment analysis of genes dysregulated in TGFBR2 knockout
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between TGFBR2 knockout cells and control cells in the posterior palate cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3094181
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorAndrew
CREEDS IDgene:2063
Cell Typeposterior palate
Gene Symbol (human)TGFBR2
Gene Symbol (mouse)Tgfbr2
Organismmouse
Perturbation Typeknockout
Characteristic Direction parameters
Control SamplesGSM1126420, GSM1126421, GSM1126422, GSM1126423, GSM1126424, GSM1126425
Perturbed SamplesGSM1126426, GSM1126427, GSM1126428, GSM1126429, GSM1126430, GSM1126431
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Datasets used in the analysis
Keyword
Tool Name
GSE46211
Gene Expression Omnibus
Transforming growth factor, beta receptor II knockout effect on embryonic posterior palate
7
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