Enrichment analysis of genes dysregulated in RUNX1 KO
Canned Analysis
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General Information
AccessionDCA00025198
TitleEnrichment analysis of genes dysregulated in RUNX1 KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between RUNX1 KO cells and control cells in the Colons from genotype: Villin-Cre + OR Cre- / Runx1-floxed strain: C57BL/6 background cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3092227
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgszeto
CREEDS IDgene:2396
Cell TypeColons from genotype: Villin-Cre + OR Cre- / Runx1-floxed strain: C57BL/6 background
Gene Symbol (human)RUNX1
Gene Symbol (mouse)Runx1
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM846857, GSM846861
Perturbed SamplesGSM846855, GSM846859
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE34292
Gene Expression Omnibus
Runx1 is a tumor suppressor gene in the mouse gastrointestinal tract
7
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