Enrichment analysis of genes dysregulated in FMR1 KO
Canned Analysis
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General Information
AccessionDCA00025267
TitleEnrichment analysis of genes dysregulated in FMR1 KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between FMR1 KO cells and control cells in the lymphoblastoid cells cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3090307
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorHollyWoodland
CREEDS IDgene:2469
Cell Typelymphoblastoid cells
Gene Symbol (human)FMR1
Gene Symbol (mouse)Fmr1
Organismhuman
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM176601, GSM176602, GSM176604, GSM176605, GSM176607, GSM176608, GSM176609, GSM176610, GSM176612, GSM176613, GSM176614, GSM176615, GSM176617, GSM176618, GSM176619
Perturbed SamplesGSM176570, GSM176575, GSM176579, GSM176583, GSM176586, GSM176589, GSM176592, GSM176594
Tools used in the analysis
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Datasets used in the analysis
Keyword
Tool Name
GSE7329
Gene Expression Omnibus
Autism, fragile X syndrome, and 15q11-q13 duplication: lymphoblastoid cells
33
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