Enrichment analysis of genes dysregulated in SOX2 KD
Canned Analysis
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General Information
AccessionDCA00025387
TitleEnrichment analysis of genes dysregulated in SOX2 KD
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between SOX2 KD cells and control cells in the mOS-482 cells cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3095649
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorlkwhite
CREEDS IDgene:2616
Cell TypemOS-482 cells
Gene Symbol (human)SOX2
Gene Symbol (mouse)Sox2
Organismmouse
Perturbation TypeKD
Characteristic Direction parameters
Control SamplesGSM1585264, GSM1585265, GSM1585266
Perturbed SamplesGSM1585267, GSM1585268, GSM1585269
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE64965
Gene Expression Omnibus
Expression profile of osteosarcoma cells in which Sox2 maintains cancer stem cells
7
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