Enrichment analysis of genes dysregulated in HDAC2 KO
Canned Analysis
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General Information
AccessionDCA00025565
TitleEnrichment analysis of genes dysregulated in HDAC2 KO
DescriptionAn enrichment analysis was performed on the top most dyresgulated genes determined by applying the principal angle method to compare gene expression between HDAC2 KO cells and control cells in the colon cell type.
Analysis URLhttp://amp.pharm.mssm.edu/PAEA?id=3094158
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorKathaLahl
CREEDS IDgene:2844
Cell Typecolon
Gene Symbol (human)HDAC2
Gene Symbol (mouse)Hdac2
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Control SamplesGSM1323977, GSM1323978, GSM1323979
Perturbed SamplesGSM1323980, GSM1323981, GSM1323982
Tools used in the analysis
Dataset Accession
PAEA
Published November 2015
Enrichment analysis tool implementing the principal angle method
3879
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE54785
Gene Expression Omnibus
The acetylome regulators Hdac1 and Hdac2 differently modulate intestinal epithelial cell dependent homeostatic responses in experimental colitis
7
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